Data Visualization and Analysis in R

Textbooks:

R for Data Science Textbook: Wickham and Grolemund
Computation Genomics in R

Data wrangling

• Top 10 Must-Know {dplyr} Commands for Data Wrangling in R

Visualization

Picking color:

• Coolors palette generator

Basic plots:
- Tidyplots
- R graph gallery

Heatmaps:

• R package for using pheatmap with minimal coding: Tidy Heatmaps
• R package for aligning heatmaps: ggalign and twitter post with example

Data Analysis

Generalized Linear Models:

• Workshop 6: Generalized linear models in R

Functional Gene Annotation:

• GOSemSim and clusterProfiler with visualization suggestions

Tips and Tricks

Export an image as ggsave("file.svg") and open in powerpoint. The image is vectorized and edit-able.